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A comparative account of protein structure prediction resources, feature-validations and application-based categorizations

SCRATCH

Tool nameSCRATCH
URLhttp://www.ics.uci.edu/~baldig/scratch/index.html
Important featuresTertiary Structure Prediction Server/Suite. Includes tools for Secondary Structure Prediction, solvent accessibility of protein, domains and other structural features.
CitationsCheng J, Randall AZ, Sweredoski MJ, Baldi P. SCRATCH: a protein structure and structural feature prediction Server/Suite. Nucleic Acids Res. 2005 Jul 1;33(Web Server/Suite issue):W72-6. PubMed PMID: 15980571.
Year of publication2005
Rank by usage frequency100
CommentsThe tools in the Server/Suite have individual limitations with respect to sequence length and operating platform.
FunctionDomain Prediction, Disorder Prediction, Secondary Structure Prediction, Server/Suite, Side Chain Modelling
CategoryOnline/Downloadable, Free for academic
PlatformUNIX, Solaris,
Other features
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Description

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